Converts an amino acid sequence into an optimized coding DNA sequence (CDS) for expression in Nicotiana benthamiana. Uses the FactorForge v3.x stable design path: DP feasibility design, profile-based rule scanning, Golden Gate domestication, and output. Returns CAI score, GC%, and the optimized DNA sequence.
Rule-based codon optimization for N. benthamiana
CAI and GC% metrics
Golden Gate / MoClo compatible domestication
Multiple optimization profiles
| Name | Type | Required | Description |
|---|---|---|---|
| sequence | string | required | Amino acid sequence (single-letter code) |
| profile | string | optional | balanced | high_cai | gc_target | assembly_friendly |
{
"mcpServers": {
"eijex": {
"type": "http",
"url": "https://mcp.eijex.com/api/mcp"
}
}
}